Research

Scientific publications

  • Cervilla, S, Grases, D, Perez, E, Real, FX, Musulen, E, Aprea, J, Esteller, M and Porta-Pardo, E.

    A technical comparison of spatial transcriptomics platforms across six cancer types

    GENOME BIOLOGY 27(1):

    [doi:10.1186/s13059-026-03937-y]

  • Hernáez, A, Camps-Vilaró, A, Polo-Alonso, S, Subirana, I, Ramos, R, de Cid, R, Rodríguez-Artalejo, F, Elosua, R, Chirlaque, MD, Amiano, P, Bermúdez-López, M, Guevara, M, Cinza-Sanjurjo, S, Sánchez, MJ, de León, AC, Laclaustra, M, Rojo-Martinez, G, Guembe-Suescun, MJ, Perez-Gomez, B, Vega-Alonso, T, Toran-Monserrat, P, Lora-Pablos, D, Huerta, JM, Valdivielso, JM, Degano, IR, Felix-Redondo, FJ, Gandarillas, AM, Valdes, S, Mundet-Tuduri, X, Sánchez, PL, Martín-Sánchez, V, Rigo, F, Alonso-Sampedro, M, Moreno-Iribas, C, Martín-Escudero, JC, Delgado, E, Grau, M, Urrutia, I, Ovejero, D, Quintela, I, Martí-Lluch, R, Blay, N, Banegas, JR, Tizón-Marcos, H, Gómez, JH, Aizpurua, A, Castro-Boqué, E, Delfrade, J, Prieto-Díaz, MA, Rodríguez-Barranco, M, Almeida-González, D, Moreno-Franco, B, Oualla-Bachiri, W, Sayón-Orea, C, Plans-Beriso, E, Lozano, JE, López-Lifante, VM, Cancelas-Navia, P, Cabrera-Castro, N, Cambray, S, Zacarías-Pons, L, Fernández-Bergés, D, Donoso-Navarro, E, Maldonado-Araque, C, Franch-Nadal, J, Dorado-Díaz, PI, Villarín-Castro, A, Frontera-Juan, G, Gude, F, Andueza, N, Téllez-Plaza, M, Ares-Blanco, J, Cruz, R, Ribas-Aulinas, M, Barretina, J, Guallar-Castillón, P, Caínzos-Achirica, M, Colorado-Yohar, SM, Llorente, A, Diaz-Tocados, JM, Ardanaz, E, Micó-Pérez, RM, Fernandez-Martinez, NF, Rodríguez-Pérez, MD, Cenarro, A, Calle-Pascual, AL and Marrugat, J.

    Cohort profile: the CORDELIA study (Collaborative cOhorts Reassembled Data to study mEchanisms and Longterm Incidence of chronic diseAses)

    European Journal of Epidemiology 40(5): 581-599

    [doi:10.1007/s10654-025-01229-6]

  • Sibai, M, Cervilla, S, Grases, D, Musulen, E, Lazcano, R, Mo, CK, Davalos, V, Fortian, A, Bernat, A, Romeo, M, Tokheim, C, Barretina, J, Lazar, AJ, Ding, L, Grande, E, Real, FX, Esteller, M, Bailey, MH and Porta-Pardo, E.

    The spatial landscape of cancer hallmarks reveals patterns of tumor ecological dynamics and drug sensitivity

    Cell Reports 44(2): 115229-115229

    [doi:10.1016/j.celrep.2024.115229]

  • Vasileva, F, Font-Lladó, R, López-Ros, V, Barretina, J, Noguera-Castells, A, Esteller, M, López-Bermejo, A and Prats-Puig, A.

    An Integrated Neuromuscular Training Intervention Applied in Primary School Induces Epigenetic Modifications in Disease-Related Genes: A Genome-Wide DNA Methylation Study

    SCANDINAVIAN JOURNAL OF MEDICINE & SCIENCE IN SPORTS 35(1):

    [doi:10.1111/sms.70012]

  • Boos, J, van der Made, CI, Ramakrishnan, G, Coughlan, E, Asselta, R, Löscher, BS, Valenti, LVC, de Cid, R, Bujanda, L, Julià, A, Pairo-Castineira, E, Baillie, JK, May, S, Zametica, B, Heggemann, J, Albillos, A, Banales, JM, Barretina, J, Blay, N, Bonfanti, P, Buti, M, Fernandez, J, Marsal, S, Prati, D, Ronzoni, L, Sacchi, N, Schultze, JL, Riess, O, Franke, A, Rawlik, K, Ellinghaus, D, Hoischen, A, Schmidt, A and Ludwig, KU.

    Stratified analyses refine association between TLR7 rare variants and severe COVID-19

    Human Genetics And Genomics Advances 5(4):

    [doi:10.1016/j.xhgg.2024.100323]

  • Vasileva, F, Hristovski, R, Font-Lladó, R, Georgiev, G, Sacot, A, López-Ros, V, Calleja-González, J, Barretina-Ginesta, J, Lopez-Bermejo, A and Prats-Puig, A.

    Physical Exercise-Induced DNA Methylation in Disease-Related Genes in Healthy Adults-A Systematic Review With Bioinformatic Analysis

    Journal of Strength and Conditioning Research 38(2): 384-393

    [doi:10.1519/JSC.0000000000004686]

  • Sol, J, Obis, E, Mota-Martorell, N, Pradas, I, Galo-Licona, JD, Martin-Gari, M, Fernandez-Bernal, A, Ortega-Bravo, M, Mayneris-Perxachs, J, Borras, C, Vina, J, de la Fuente, M, Mate, I, Biarnes, C, Pedraza, S, Vilanova, JC, Brugada, R, Ramos, R, Serena, J, Ramio-Torrenta, L, Pineda, V, Daunis-I-Estadella, P, Thio-Henestrosa, S, Barretina, J, Garre-Olmo, J, Portero-Otin, M, Fernandez-Real, JM, Puig, J, Jove, M and Pamplona, R.

    Plasma acylcarnitines and gut-derived aromatic amino acids as sex-specific hub metabolites of the human aging metabolome

    AGING CELL 22(6):

    [doi:10.1111/acel.13821]

  • Tiedt, R, King, FJ, Stamm, C, Niederst, MJ, Delach, S, Zumstein-Mecker, S, Meltzer, J, Mulford, IJ, Labrot, E, Engstler, BS, Baltschukat, S, Kerr, G, Golji, J, Wyss, D, Schnell, C, Ainscow, E, Engelman, JA, Sellers, WR, Barretina, J, Caponigro, G and Porta, DG.

    Integrated CRISPR screening and drug profiling identifies combination opportunities for EGFR, ALK, and BRAF/MEK inhibitors

    Cell Reports 42(4):

    [doi:10.1016/j.celrep.2023.112297]

  • Barreiro, A, Prenafeta, A, Bech-Sabat, G, Roca, M, Mur, EP, March, R, Gonzalez-Gonzalez, L, Madrenas, L, Corominas, J, Fernandez, A, Moros, A, Canete, M, Molas, M, Pentinat-Pelegrin, T, Panosa, C, Moreno, A, Molas, EP, Vilarrassa, EP, Palmada, J, Garriga, C, Cabanas, TP, Iglesias-Fernandez, J, Vergara-Alert, J, Lorca-Oro, C, Roca, N, Fernandez-Bastit, L, Rodon, J, Perez, M, Segales, J, Pradenas, E, Marfil, S, Trinite, B, Ortiz, R, Clotet, B, Blanco, J, Pedroza, JD, Carrasco, RA, Salgado, YR, Loubat-Casanovas, J, Larripa, SC, Prado, JG, Barretina, J, Sistere-Oro, M, Rica, PC, Meyerhans, A and Ferrer, L.

    Preclinical evaluation of a COVID-19 vaccine candidate based on a recombinant RBD fusion heterodimer of SARS-CoV-2

    iScience 26(3):

    [doi:10.1016/j.isci.2023.106126]

  • Degenhardt, F, Ellinghaus, D, Juzenas, S, Lerga-Jaso, J, Wendorff, M, Maya-Miles, D, Uellendahl-Werth, F, ElAbd, H, Ruhlemann, MC, Arora, J, Ozer, O, Lenning, OB, Myhre, R, Vadla, MS, Wacker, EM, Wienbrandt, L, Blandino Ortiz, A, de Salazar, A, Garrido Chercoles, A, Palom, A, Ruiz, A, Garcia-Fernandez, AE, Blanco-Grau, A, Mantovani, A, Zanella, A, Holten, AR, Mayer, A, Bandera, A, Cherubini, A, Protti, A, Aghemo, A, Gerussi, A, Ramirez, A, Braun, A, Nebel, A, Barreira, A, Lleo, A, Teles, A, Kildal, AB, Biondi, A, Caballero-Garralda, A, Ganna, A, Gori, A, Gluck, A, Lind, A, Tanck, A, Hinney, A, Carreras Nolla, A, Fracanzani, AL, Peschuck, A, Cavallero, A, Dyrhol-Riise, AM, Ruello, A, Julia, A, Muscatello, A, Pesenti, A, Voza, A, Rando-Segura, A, Solier, A, Schmidt, A, Cortes, B, Mateos, B, Nafria-Jimenez, B, Schaefer, B, Jensen, B, Bellinghausen, C, Maj, C, Ferrando, C, de la Horra, C, Quereda, C, Skurk, C, Thibeault, C, Scollo, C, Herr, C, Spinner, CD, Gassner, C, Lange, C, Hu, C, Paccapelo, C, Lehmann, C, Angelini, C, Cappadona, C, Azuure, C, Bianco, C, Cea, C, Sancho, C, Hoff, DAL, Galimberti, D, Prati, D, Haschka, D, Jimenez, D, Pestana, D, Toapanta, D, Muniz-Diaz, E, Azzolini, E, Sandoval, E, Binatti, E, Scarpini, E, Helbig, ET, Casalone, E, Urrechaga, E, Paraboschi, EM, Pontali, E, Reverter, E, Calderon, EJ, Navas, E, Solligard, E, Contro, E, Arana-Arri, E, Aziz, F, Garcia, F, Garcia Sanchez, F, Ceriotti, F, Martinelli-Boneschi, F, Peyvandi, F, Kurth, F, Blasi, F, Malvestiti, F, Medrano, FJ, Mesonero, F, Rodriguez-Frias, F, Hanses, F, Muller, F, Hemmrich-Stanisak, G, Bellani, G, Grasselli, G, Pezzoli, G, Costantino, G, Albano, G, Cardamone, G, Bellelli, G, Citerio, G, Foti, G, Lamorte, G, Matullo, G, Baselli, G, Kurihara, H, Neb, H, My, I, Kurth, I, Hernandez, I, Pink, I, de Rojas, I, Galvan-Femenia, I, Holter, JC, Afset, JE, Heyckendorf, J, Kassens, J, Damas, JK, Rybniker, J, Altmuller, J, Ampuero, J, Martin, J, Erdmann, J, Banales, JM, Badia, JR, Dopazo, J, Schneider, J, Bergan, J, Barretina, J, Walter, J, Hernandez Quero, J, Goikoetxea, J, Delgado, J, Guerrero, JM, Fazaal, J, Kraft, J, Schroder, J, Risnes, K, Banasik, K, Muller, KE, Gaede, KI, Garcia-Etxebarria, K, Tonby, K, Heggelund, L, Izquierdo-Sanchez, L, Bettini, LR, Sumoy, L, Sander, LE, Lippert, LJ, Terranova, L, Nkambule, L, Knopp, L, Gustad, LT, Garbarino, L, Santoro, L, Tellez, L, Roade, L, Ostadreza, M, Intxausti, M, Kogevinas, M, Riveiro-Barciela, M, Berger, MM, Schaefer, M, Niemi, MEK, Gutierrez-Stampa, MA, Carrabba, M, Figuera Basso, ME, Valsecchi, MG, Hernandez-Tejero, M, Vehreschild, MJGT, Manunta, M, Acosta-Herrera, M, D'Angio, M, Baldini, M, Cazzaniga, M, Grimsrud, MM, Cornberg, M, Nothen, MM, Marquie, M, Castoldi, M, Cordioli, M, Cecconi, M, D'Amato, M, Augustin, M, Tomasi, M, Boada, M, Dreher, M, Seilmaier, MJ, Joannidis, M, Wittig, M, Mazzocco, M, Ciccarelli, M, Rodriguez-Gandia, M, Bocciolone, M, Miozzo, M, Imaz Ayo, N, Blay, N, Chueca, N, Montano, N, Braun, N, Ludwig, N, Marx, N, Martinez, N, Cornely, OA, Witzke, O, Palmieri, O, Faverio, P, Preatoni, P, Bonfanti, P, Omodei, P, Tentorio, P, Castro, P, Rodrigues, PM, Espana, PP, Hoffmann, P, Rosenstiel, P, Schommers, P, Suwalski, P, de Pablo, R, Ferrer, R, Bals, R, Gualtierotti, R, Gallego-Duran, R, Nieto, R, Carpani, R, Morilla, R, Badalamenti, S, Haider, S, Ciesek, S, May, S, Bombace, S, Marsal, S, Pigazzini, S, Klein, S, Pelusi, S, Wilfling, S, Bosari, S, Volland, S, Brunak, S, Raychaudhuri, S, Schreiber, S, Heilmann-Heimbach, S, Aliberti, S, Ripke, S, Dudman, S, Wesse, T, Zheng, T, Bahmer, T, Eggermann, T, Illig, T, Brenner, T, Pumarola, T, Feldt, T, Folseraas, T, Gonzalez Cejudo, T, Landmesser, U, Protzer, U, Hehr, U, Rimoldi, V, Monzani, V, Skogen, V, Keitel, V, Kopfnagel, V, Friaza, V, Andrade, V, Moreno, V, Albrecht, W, Peter, W, Poller, W, Farre, X, Yi, X, Wang, X, Khodamoradi, Y, Karadeniz, Z, Latiano, A, Goerg, S, Bacher, P, Koehler, P, Tran, F, Zoller, H, Schulte, EC, Heidecker, B, Ludwig, KU, Fernandez, J, Romero-Gomez, M, Albillos, A, Invernizzi, P, Buti, M, Duga, S, Bujanda, L, Hov, JR, Lenz, TL, Asselta, R, de Cid, R, Valenti, L, Karlsen, TH, Caceres, M and Franke, A.

    Detailed stratified GWAS analysis for severe COVID-19 in four European populations

    Human Molecular Genetics 31(23): 3945-3966

    [doi:10.1093/hmg/ddac158]

  • Sacot, A, Lopez-Ros, V, Prats-Puig, A, Escosa, J, Barretina, J and Calleja-Gonzalez, J.

    Multidisciplinary Neuromuscular and Endurance Interventions on Youth Basketball Players: A Systematic Review with Meta-Analysis and Meta-Regression

    International Journal of Environmental Research and Public Health 19(15):

    [doi:10.3390/ijerph19159642]

  • Bernat-Peguera, A, Trigueros, M, Ferrando-Diez, A, Ibanez, C, Bystrup, S, Martinez-Cardus, A, Margeli, M and Martinez-Balibrea, E.

    Efficacy of CT-P6 (trastuzumab biosimilar) versus reference trastuzumab in combination with pertuzumab in HER2-positive early-stage breast cancer: Preclinical and real-life clinical data

    Breast 62: 1-9

    [doi:10.1016/j.breast.2022.01.007]

  • Garcia-Valverde, A, Rosell, J, Sayols, S, Gomez-Peregrina, D, Pilco-Janeta, DF, Olivares-Rivas, I, de Alava, E, Maurel, J, Rubio-Casadevall, J, Esteve, A, Gut, M, Valverde, C, Barretina, J, Carles, J, Demetri, GD, Fletcher, JA, Arribas, J and Serrano, C.

    E3 ubiquitin ligase Atrogin-1 mediates adaptive resistance to KIT-targeted inhibition in gastrointestinal stromal tumor

    Oncogene 40(48): 6614-6626

    [doi:10.1038/s41388-021-02049-0]

  • de Porras, VR, Wang, XC, Palomero, L, Marin-Aguilera, M, Sole-Blanch, C, Indacochea, A, Jimenez, N, Bystrup, S, Bakht, M, Conteduca, V, Piulats, JM, Buisan, O, Suarez, JF, Pardo, JC, Castro, E, Olmos, D, Beltran, H, Mellado, B, Martinez-Balibrea, E, Font, A and Aytes, A.

    Taxane-induced Attenuation of the CXCR2/BCL-2 Axis Sensitizes Prostate Cancer to Platinum-based Treatment

    European Urology 79(6): 722-733

    [doi:10.1016/j.eururo.2020.10.001]

  • de Porras, VR, Bystrup, S, Cabrero-de las Heras, S, Musulen, E, Palomero, L, Alonso, MH, Nieto, R, Arango, D, Moreno, V, Queralt, C, Manzano, JL, Layos, L, Buges, C and Martinez-Balibrea, E.

    Tumor Expression of Cyclin-Dependent Kinase 5 (Cdk5) Is a Prognostic Biomarker and Predicts Outcome of Oxaliplatin-Treated Metastatic Colorectal Cancer Patients

    Cancers 11(10):

    [doi:10.3390/cancers11101540]